BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013F11LP1|AL426567
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig903 1726 0.0
>3x_Contig903
Length = 4000
Score = 1726 bits (870), Expect = 0.0
Identities = 873/874 (99%)
Strand = Plus / Plus
Query: 1 atcaagactacattataccacagtcacagttggccgcccagtatttcgagctacaaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1888 atcaagactacattataccacagtcacagttggccgcccagtatttcgagctacaaattg 1947
Query: 61 gcgacaagaccttaaggctctctaaggacgaaatcaccttgggagagaaatgtatgaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1948 gcgacaagaccttaaggctctctaaggacgaaatcaccttgggagagaaatgtatgaagt 2007
Query: 121 tgtctggaactgcaagagcagcgatagaaaacgctcttggcgaaaagattcaacgcaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2008 tgtctggaactgcaagagcagcgatagaaaacgctcttggcgaaaagattcaacgcaatg 2067
Query: 181 aagtacagtataatgtagacgaagaactacttcccgacttgcctaaccccaatgctgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2068 aagtacagtataatgtagacgaagaactacttcccgacttgcctaaccccaatgctgaaa 2127
Query: 241 ctggagctacaaatcaaccagctggcggcatactagcgcggatgaacattggatgggaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2128 ctggagctacaaatcaaccagctggcggcatactagcgcggatgaacattggatgggaat 2187
Query: 301 caccacgggtcattttccaatggatcatatcaactgtcactggtcgcagtggctttttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2188 caccacgggtcattttccaatggatcatatcaactgtcactggtcgcagtggctttttcc 2247
Query: 361 ttttccttgcatttgaactattcccaatattaccactttggcttttcaattccatcgcgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2248 ttttccttgcatttgaactattcccaatattaccactttggcttttcaattccatcgcgg 2307
Query: 421 gaatagtagtggcaagactgatatggagcaagttacagttgggaaagagggtcagaagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2308 gaatagtagtggcaagactgatatggagcaagttacagttgggaaagagggtcagaagga 2367
Query: 481 ttgttattggttcatacgatgagatgccaacagaagagatagagcaaatcagaacattat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2368 ttgttattggttcatacgatgagatgccaacagaagagatagagcaaatcagaacattat 2427
Query: 541 tgaagaatgagaaattcccaatcgaatttttcgaaaggcttgctcgtacaagcaaggtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2428 tgaagaatgagaaattcccaatcgaatttttcgaaaggcttgctcgtacaagcaaggtat 2487
Query: 601 caactgtattatgcacgcaactcgagcagaaccaagatttgctagaactccttttacaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2488 caactgtattatgcacgcaactcgagcagaaccaagatttgctagaactccttttacaag 2547
Query: 661 agatcaagcgcaatcccgtgctcgaagaacaattgagtkaaaacgaacaattggcaactc 720
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2548 agatcaagcgcaatcccgtgctcgaagaacaattgagtcaaaacgaacaattggcaactc 2607
Query: 721 aacacaaatacattttgaagcaatttgtcttactgacaaccacaggggtcggtaatgaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2608 aacacaaatacattttgaagcaatttgtcttactgacaaccacaggggtcggtaatgaat 2667
Query: 781 ctagggacaagcttaaatacttgtactatgaattgttccgtgatacatttgagaaggtgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2668 ctagggacaagcttaaatacttgtactatgaattgttccgtgatacatttgagaaggtgg 2727
Query: 841 acaaattgttaacgcaagaattgcacagccttcc 874
||||||||||||||||||||||||||||||||||
Sbjct: 2728 acaaattgttaacgcaagaattgcacagccttcc 2761
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5953
Number of Sequences: 1807
Number of extensions: 5953
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)